Difference between revisions of "Main Page"

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===[[Articles_Using_LipidXplorer | LipidXplorer MFQL Bibliography ]]===
 
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[[LX Reference Yadav 2015 | Yadav S, Garner K, Georgiev P, Li M, Gomez-Espinosa E, Panda A, Mathre S, Okkenhaug H, Cockcroft S and Raghu P: '''RDGBα, a PI-PA transfer protein regulates G-protein coupled PtdIns(4,5)P2 signalling during Drosophila phototransduction''' ''JCS 2015 July'']]
 
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[[LX Reference Khaliullina 2015 | Khaliullina H, Bilgin M, Sampaio JL, Shevchenko A, Eaton S:'''Endocannabinoids are conserved inhibitors of the Hedgehog pathway''' ''PNAS 2015 Feb 2'']]
 
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[[LX Reference Hebbar 2014 | Hebbar S, Schulz W D, Sauer U and Schwudke D :'''Laser Capture Microdissection Coupled with On-Column Extraction LC-MSn Enables Lipidomics of Fluorescently Labeled Drosophila Neurons''' ''Anal. Chem. 2014 May 12, 86(11)'']]
 
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[[LX Reference Papan 2014 | Papan C, Penkov S, Herzog R, Thiele C, Kurzchalia T, Shevchenko A:'''Systematic screening for novel lipids by shotgun lipidomics.''' ''Anal. Chem. 2014 Jan 28, 86(5)'']]
 
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[[LX Reference Graessler 2013 | Gaessler J, Bornstein T D, Goel D, Bhalla V P, Lohmann T, Wolf T, Koch M, Qin Y, Licinio J, Wong M-L, Chavakis T, Xu A, Shevchenko A, Schuhmann K, Schwarz P E H, Patel A, Bornstein S R:'''Lipidomic profiling before and after Roux-en-Y gastric bypass in obese patients with diabetes''' ''The Pharmacogenomics Journal 2013 Dec 24'']]
 
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[[LX Reference Herzog 2013 | Herzog R, Schwudke D, Shevchenko A:'''LipidXplorer: Software for Quantitative Shotgun Lipidomics Compatible with Multiple Mass Spectrometry Platforms''' ''Current Protocols in Bioinformatics 2013 Oct 15'']]
 
  
 
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Revision as of 13:39, 22 July 2026

LipidXplorer Wiki

Brought to you by

LIFS Portal

MPI-CBG ISAS e.V. FZ-Borstel

Quick Start

Click on the link above for a quick overview and start to LipidXplorer

LipidXplorer Documentation

MFQL library

Troubleshooting

LXMerge: A tool for merging multiple results

Get LipidXplorer

If you are on Windows you can try the Single file executable for Windows If you are on Linux you can try the Single file executable for Linux

LipidXplorer is published under GPL and available here: [LipidXplorer GitLab@ISAS]. Check out the LipidXplorer installation instructions for help.

Citing LipidXplorer

If you use LipidXplorer, please cite the original LipidXplorer publications:

Herzog R, Schuhmann K, Schwudke D, Sampaio JL, Bornstein SR, Schroeder M, et al. (2012) LipidXplorer: A Software for Consensual Cross-Platform Lipidomics. PLoS ONE 7(1): e29851. https://doi.org/10.1371/journal.pone.0029851

Herzog R, Schwudke D, Schuhmann K, Sampaio JL, Bornstein SR, Schroeder M, Shevchenko A (2011) A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language. Genome Biol. 2011;12(1):R8. https://doi.org/10.1186/gb-2011-12-1-r8

Additionally, if you are using a particular version of LipidXplorer, from version 1.2.8 onwards, each release has a citable DOI for LipidXplorer@Zenodo.

Feature suggestions

LipidXplorer will be further developed all the time. If you have suggestions for useful features, please write to the LipidXplorer mailing list and we will post them here. We also will post a status report on the suggested features: the LipidXplorer wishlist.


Contact

For any questions and suggestions please put them on the [LipidXplorer Google Group]

If you do not want to join google, please write us (mirandaa@mpi-cbg.de or herzog@mpi-cbg.de) an email and I'll add you to the group.

If you want to contribute to the Wiki please write to mirandaa@mpi-cbg.de or herzog@mpi-cbg.de or also to the google group.

Retrieved from "https://lifs-tools.org/wiki/index.php?title=Main_Page&oldid=434"